Publications

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Jeffrey T. Miller, Noah M. Reid, Diane Nacci, Andrew Whitehead. 2019. Developing a high-quality linkage map for the fish Fundulus heteroclitus. Submitted to G3.

Elias M. Oziolor, Noah M. Reid, Sivan Yair, Kristin M. Lee, Sara Guberman Verploeg, Peter C. Bruns PC, Joseph R. Shaw, Andrew Whitehead, Cole W. Matson. 2019. Adaptive introgression enables evolutionary rescue from extreme environmental pollution. Science. In press.

Rachel Rodgers, Jen Roach, Noah M. Reid, Andrew Whitehead, and David D. Duvernell. 2018. Phylogenomic analysis of Fundulidae (Teleostei: Cyprinodotiformes) using RNA-sequencing Data. Molecular Phylogenetics and Evolution, 121:150-157.

Noah M. Reid, Craig E. Jackson, Don Gilbert, Patrick Minx, Michael J. Montague, Thomas H. Hampton, Lily W. Helfrich, Benjamin L. King, Diane E. Nacci, Neel Aluru, Sibel I. Karchner, John K. Colbourne, Mark E. Hahn, Joseph R. Shaw, Marjorie F. Oleksiak, Doug L. Crawford, Wesley C. Warren, and Andrew Whitehead. 2017. The landscape of extreme genomic variation in the highly adaptable Atlantic killifish. Genome Biology and Evolution, 9(3):659-676.

Andrew Whitehead, Bryan W. Clark, Noah M. Reid, Mark E. Hahn, and Diane Nacci. 2017. When evolution is the solution to pollution: Key principles, and lessons from rapid repeated adaptation of killifish (Fundulus heteroclitus) populations. Evolutionary Applications, 2017:1-22.

Erika B. Holland, Jared V. Goldstone, Isaac N. Pessah, Andrew Whitehead, Noah M. Reid, Sibel Karchner, Mark E. Hahn, Diane E. Nacci, Bryan W. Clark, and John J. Stegeman. 2017. Ryanodine receptor and FK506 binding protein 1 in the Atlantic killifish (Fundulus heteroclitus): A phylogenetic and population-based comparison. Aquatic Toxicology, 192:105-115.

Noah M. Reid NM, Dina A. Proestou, Bryan W. Clark,Wesley C. Warren,John K. Colbourne, Joseph R. Shaw, Sibel I. Karchner, Mark E. Hahn, Diane Nacci, Marjorie F. Oleksiak, Doug L. Crawford, and Andrew Whitehead. 2016. The genomic landscape of rapid repeated evolutionary adaptation to toxic pollution in wild fish. Science, 354(6317):1305-1308.

Bryan C Carstens, Michael Gruenstaeudl, and Noah M. Reid. 2016. Community trees: Identifying codiversification in the Paramo dipteran community. Evolution, 70(5): 1080-0193.

Michael Gruenstaeudl, Noah M. Reid, Gregory L. Wheeler, and Bryan C. Carstens. 2016. Posterior predictive checks of coalescent models: P2C2M, an R package. Molecular ecology resources, 16(1), 193-205..

Noah M. Reid, Andrew Whitehead. 2015. Functional genomics to assess biological responses to marine pollution at physiological and evolutionary timescales: toward a vision of predictive ecotoxicology. Briefings in functional genomics elv060.

Jack Sullivan, John R Demboski, Kaycee C Bell, Sarah Hird, Brice Sarver, Noah Reid, and Jeff M Good. (2014). Divergence with gene flow within the recent chipmunk radiation (Tamias). Heredity 113.3: 185-194.

Noah M. Reid, Sarah Hird, Jeremy M Brown, John D McVay, Tara A Pelletier and Bryan C Carstens. 2013. Poor fit to the multispecies coalescent is widely detectable in empirical data. Systematic Biology.

Bryan C Carstens, Tara A. Pelletier, Jordan D. Satler, Noah M. Reid. 2013. How to fail at species delimitation. Molecular Ecology. 22(17):4369-4383.

Noah M. Reid, Bryan C. Carstens. 2012. Phylogenetic estimation error can decrease the accuracy of species delimitation: a Bayesian implementation of the general mixed Yule-coalescent model. BMC Evolutionary Biology. 12:196. DOI: 10.1186/1471-2148-12-196.

Noah M. Reid, John R. Demboski, Jack Sullivan. 2012. Phylogeny Estimation of the Radiation of Western North American Chipmunks (Tamias) in the Face of Introgression Using Reproductive Protein Genes. Systematic Biology. 61 (1): 44-62.

Noah Reid, Sarah Hird, Albrecht Schulte-Hostedde, and Jack Sullivan. 2010. Examination of nuclear loci across a zone of mitochondrial introgression between Tamias ruficaudus and T. amoenus. Journal of Mammalogy 91(6):1389-1400.

Sarah M. Hird, Noah Reid, John Demboski and Jack Sullivan. 2010. Introgression at differentially aged hybrid zones in red-tailed chipmunks. Genetica 138:869-883.

Bryan C. Carstens, Holly N. Stoute, Noah M. Reid. 2009. An information-theoretical approach to phylogeography. Molecular Ecology 18(20):4270-4282.

Jeffrey M. Good, Sarah M. Hird, Noah Reid, John R. Demboski, Scott J. Steppan, Tina R. Martin-Nims, Jack Sullivan. 2008. Ancient hybridization and mitochondrial capture between two species of chipmunks. Molecular Ecology 17(5):1313-1327.

Polly Campbell, Noah M. Reid, Akbar Zubaid, nAdura M. Adnan, Thomas H. Kunz. 2006. Comparative Roosting Ecology of Cynopterus (Chiroptera: Pteropodidae) Fruit Bats in Peninsular Malaysia. Biotropica 38(6):725-734.